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Pull request overview
This PR refactors the IGV repaint cycle to simplify the logic and improve thread safety. The main change replaces complex track-based pending state tracking with a simple boolean flag, reducing code complexity while maintaining correct behavior.
Changes:
- Simplified repaint synchronization by replacing
Set<Track> pendingTrackswithboolean repaintPendingflag - Improved thread safety by extending the synchronization lock to cover the entire check-and-set operation when building the futures list
- Removed redundant EDT invocation wrapper in
checkPanelLayouts()since all callers already invoke it on the EDT - Cleaned up unused fields in RulerPanel (
darkModeandshowInsertions)
Reviewed changes
Copilot reviewed 3 out of 3 changed files in this pull request and generated no comments.
| File | Description |
|---|---|
| test/sessions/100_bigwigs.xml | Updated test session configuration with different locus, reordered resources, and adjusted panel dimensions |
| src/main/java/org/igv/ui/panel/RulerPanel.java | Removed unused darkMode and showInsertions fields and cleaned up whitespace |
| src/main/java/org/igv/ui/IGV.java | Refactored repaint cycle: replaced track-based pending state with boolean flag, improved synchronization, and streamlined logic |
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