column: morphology and electrophysiology across layers

This repository contains analyses of the morphology and electrophysiology of inhibitory neurons (INHs) in a column of rat barrel cortex.

Running Analyses

All scripts are in the scripts/ folder:

• step1_dataset_overview.m – Visualize the morphology and electrophysiology in the dataset
• step2_ephys_datasets.m – Preprocess raw recordings and assemble standardized datasets.
• step3_ephys_features.m – Compute electrophysiological features using sparse principal components
• step4_morph_features.m – Calculate a rich set of morphological features
• step5_plot_features.m – Plot morphological and electrophysiological features

Figures are saved in the results/ folder.

Running Tests

Unit tests are located in the tests/ folder. To run all tests:

results = runtests('tests');
table(results)