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Fhl dev#133

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hailingfang wants to merge 2 commits intokharchenkolab:masterfrom
hailingfang:fhl_dev
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Fhl dev#133
hailingfang wants to merge 2 commits intokharchenkolab:masterfrom
hailingfang:fhl_dev

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@hailingfang
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1)change cmake command which used to build the software.
2)change cmake directive to find bamtools library.


find_path(BAMTOOLS_INCLUDE_DIR api/BamReader.h PATHS ${BAMTOOLS_ROOT}/include PATH_SUFFIXES bamtools ../include ../include/bamtools)
find_library(BAMTOOLS_LIBRARY bamtools PATHS ${BAMTOOLS_ROOT}/lib PATH_SUFFIXES bamtools ../lib)
find_library(BAMTOOLS_LIBRARY bamtools PATHS ${BAMTOOLS_ROOT}/lib64 ${BAMTOOLS_ROOT}/lib PATH_SUFFIXES bamtools ../lib)
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@benjaminfang The default is /lib64? We could check whether this exists in the Dockerfile + Docker image...

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OK. On my system, CentOS8, it is.

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