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27 followers · 74 following

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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madsondeluna/README.md

Hello World!

My scientific papers are available on Google Scholar
You can find more information about my projects and publications at ResearchGate, ORCID and Lattes
Reach me at madsondeluna@gmail.com, madsondeluna@ufmg.br or madsondeluna@usp.br
You can also connect with me on Linkedin or X

CV/Portfolio

Visit my website: https://madsondeluna.github.io/

Education:

PhD Student in Bioinformatics @ UFMG
MBA Student in Software Engineering @ USP
Spc Student in Data Science & Analytics @ PUC
MSc in Genetics & Molecular Biology (2024) @ UFPE
BSc in Biomedical Sciences (2022) @ UFPE
Tech in Software Development (2013) @ ETEPE

Featured Projects

(i) AMPidentifier - Antimicrobial Peptide Prediction Toolkit @ GitHub

Open-source Python toolkit for predicting antimicrobial peptides using ensemble machine learning (RF, SVM, GB) with 88.45% accuracy. Features automated physicochemical descriptor extraction, modular architecture for external model integration, and CLI-based reproducible workflows. Registered at INPI (BR 51 2025 005859-4).

Tech Stack: Python, Scikit-learn, StandardScaler, Machine Learning, CLI

(ii) GETVar - Genetic Variant Annotation Tool @ GitHub

Web-based application for clinical genetic variant analysis and annotation. Processes VCF files through automated Snakemake workflows, integrating data from dbSNP, ClinVar, and Ensembl to provide comprehensive variant annotations including clinical significance, population frequencies, and functional consequences for diagnostic support.

Tech Stack: Python, Flask, Snakemake, Bootstrap, REST APIs (dbSNP, ClinVar, Ensembl)

Licenses & Certifications:

Generative AI - MIT Professional Education - 2025
Agile Project Management Professional Certificate - Atlassian - 2025
Career Essentials in Project Management - Microsoft - 2025
Data-Driven Product Management - NASBA - 2025
Microsoft Azure Al Essentials: Workloads and Machine Learning - Microsoft - 2025
Requirements Engineering and Agile Product Management - PUC-Rio - 2025
The Data Science of Healthcare, Medicine, and Public Health - LinkedIn Learning - 2025
Advanced Gemini for Developers - Deep Mind / Google - 2024
Career Essentials in GitHub Professional Certificate - GitHub - 2024
Project Management - Project Management Institute - 2024
Python Programming from Basic to Advanced - Udemy - 2022
Bioinformatics with Python - Udemy - 2022
(+) More Achievements Here

Languages and Tools:


arduino c figma git css3 html5 java linux mysql opencv python scikit_learn seaborn pytorch tensorflow


stats graph languages graph

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  1. AMPidentifier AMPidentifier Public

    AMPidentifier: A modular python toolkit for predicting antimicrobial peptides using ensemble machine learning (BR 51 2025 005859-4)

    HTML

  2. getvar_mvp getvar_mvp Public

    O GetVar é útil para o auxílio a diagnósticos genéticos e aconselhamentos, permitindo decisões baseadas em dados com respaldo científico, otimizando tempo e servindo de suporte ao sistema de decisã…

    HTML

  3. howtogit howtogit Public

    This repository serves as a refresher for Git commands and as a didactic resource to learn through a CLI-based approach, helping users understand concepts with practical, hands-on examples.

    Shell 3

  4. nextflow-case nextflow-case Public

    AMPscan é um pipeline de bioinformática desenvolvido com Nextflow para screening e análise de peptídeos antimicrobianos (AMPs) em sequências nucleotídicas. Inspirado no nf-core/funcscan, este pipel…

    Nextflow

  5. mvp_pucrio_data_analysis mvp_pucrio_data_analysis Public

    MVP de análise de dados com boas práticas, usando o dataset de câncer de mama. A análise segue o Módulo 1 da especialização em Data Science da PUC-Rio, com foco em inspeção, limpeza, visualização e…

    Jupyter Notebook 1

  6. mvp_pucrio_data_analytics_and_machine_learning mvp_pucrio_data_analytics_and_machine_learning Public

    MVP referente a sprint de Machine Learning & Analytics (40530010056_20250_01) da Pós-Graduação em Data Science and Analytics da PUC-Rio.

    Jupyter Notebook