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@alexskr alexskr commented Nov 7, 2025

This PR resolves unit test stability issues introduced after merging #196

alexskr and others added 17 commits October 31, 2025 14:33
…ests

Replace non-idiomatic assertions with Minitest equivalents:
- assert(x == y) -> assert_equal
- .eql?() -> assert_equal
- assert !x.empty? -> assert_operator x.length, :>, 0
- submissions.all? -> submissions.each for better error messages

Extract repeated contact validation into helper method to reduce duplication.

Fix intermittent test failures by sorting array keys before comparison to handle non-deterministic ordering.
refs #197
- Replace class variables (@@) with class instance variables using accessors
- Add attr_accessor definitions for shared test state
- Modernize assertions to Minitest style (assert_equal, assert_includes, assert_nil)
- Improve code formatting and readability
…dition

- Replace random .sample(3) with deterministic .first(3)
- Use dynamic assertion for keep_ids count instead of hardcoded value
- Capture process_id before use for clarity
- Simplify polling loop condition to check only for 'done' or 'errors'
- Clean up assertion message formatting for consistency
…n/deletion

- Replace `assert 201, ...` with `assert_equal 201, ...` to properly compare response status.
- Add GET checks after slice creation to confirm the new slice exists.
- Remove redundant manual reset of LinkedData.settings.enable_security.
- Update DELETE test to expect 204 (No Content) instead of 201.
- Add GET checks after deletion to verify the slice was actually removed.
- Add explicit flunk when status_payload contains 'errors'
  to prevent false positives from incomplete or invalid responses
- Ensure test fails immediately on backend error instead of silently skipping assertions
Restore LinkedData.settings.enable_slices to its original value after tests.
…com:ncbo/ontologies_api into refactor/tests-stability-and-minitest-style
… user helpers

This change refactors `TestOntologySubmissionsController` to eliminate
suite-level globals and class-variable state in favor of per-test setup
and shared helpers:

- Replace `before_suite` + `@@acronym`/`@@name`/`@@file_params` with
  per-test `setup` that generates a unique ontology acronym and creates
  an ontology administered by a shared test user.
- Introduce a suite-local `USERNAME = "test_user"` and use
  `ensure_user(USERNAME)` to guarantee the user exists without races.
- Normalize assertion style:
  - Use `assert_equal(expected, actual, message)` with parentheses
  - Remove `msg=` pseudo-named args
  - Add `.sort` where appropriate when comparing unordered keys
- Replace direct references to `@@acronym`/`@@name` with instance vars
  (`@acronym`, `@name`).

New helper methods (in the base test class) used by this suite:
- `create_user(username, email:, password:)` — always creates a user
- `ensure_user(username, email:, password:)` — idempotently finds or creates
- `delete_user(username)` — removes a user if present

Notes:
- `delete_ontologies_and_submissions` now runs in `setup` to guarantee
  a clean slate per test. `after_all` also cleans up the shared user via
  `delete_user(USERNAME)`. If the extra cleanup proves redundant, we can
  drop `before_all`/`after_all` and keep only the per-test cleanup.
…st-style

Refactor/tests stability and minitest style
@alexskr alexskr marked this pull request as ready for review November 7, 2025 19:59
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codecov-commenter commented Nov 7, 2025

Codecov Report

❌ Patch coverage is 66.66667% with 1 line in your changes missing coverage. Please review.
✅ Project coverage is 73.46%. Comparing base (558c168) to head (f115fbb).
⚠️ Report is 1 commits behind head on develop.

Files with missing lines Patch % Lines
controllers/ontology_submissions_controller.rb 0.00% 1 Missing ⚠️
Additional details and impacted files
@@             Coverage Diff             @@
##           develop     #199      +/-   ##
===========================================
+ Coverage    72.86%   73.46%   +0.60%     
===========================================
  Files           63       63              
  Lines         3376     3377       +1     
===========================================
+ Hits          2460     2481      +21     
+ Misses         916      896      -20     
Flag Coverage Δ
unittests 73.46% <66.66%> (+0.60%) ⬆️

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@alexskr alexskr merged commit 558f569 into develop Nov 7, 2025
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4 participants