Ontoportal lirmm/bugfix/ontology level annotations #28
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…esolve dependencies when building jar
… graph (like the versionInfo is added) using the omv:URI property
…y work with owl, obo and another one
…etting the imports ontology IRI
…e to pass versionInfo
… and extracting ontologyIRI + all ontology metadata + imports directly from the main ontology in addOntologyIRIAndMetadata (formerly addOntologyIRI)
…wl:imports extraction)
=> « stop using addGroundMetadata (was getting metadata for imports also), and extracting ontologyIRI + all ontology metadata + imports directly from the main ontology in addOntologyIRIAndMetadata (formerly addOntologyIRI) »
=> « fix how we get versionInfo for OBO ontologies »
=> « now adding all ontologies metadata to the output file (even imported ontologies) »
…ncbo_merge_master
…ncbo_merge_master
…ive (Exception in thread "main" java.lang.NoClassDefFoundError: javax/xml/bind/annotation/adapters/HexBinaryAdapter)
add guard to avoid .get() of absent value
* Add IRIMapper for SKOS Core Vocabulary Resolves #22 * Update developer details * Fix insecure link warning * Remove defunct support list archive * Bump commons-csv from 1.9.0 to 1.10.0 * Bump logback-classic from 1.2.11 to 1.4.11 * Update developer and contributor details * [maven-release-plugin] prepare release owlapi-wrapper-1.4.2 * [maven-release-plugin] prepare for next development iteration * [maven-release-plugin] rollback the release of owlapi-wrapper-1.4.2 * [maven-release-plugin] prepare release v1.4.2 * [maven-release-plugin] prepare for next development iteration
…ontology Fix: move sub.get() after the check to prevent expection
…vel-annotation-imports
…only-master-ontology-annotations
…tions' into ontoportal-lirmm/bugfix/ontology-level-annotations
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This PR incorporates a code sync with the AgroPortal / ontoportal-lirrm codebase, aligning functionality and behavior across both forks.
omv:useImportsannotation assertions to the target ontology for each named ontology imported by the source ontology, making import relationships explicitly visible as metadata.See: