Usage
Development
cookbook is a comprehensive toolbox designed to streamline the
preprocessing of brain MRI data for deep learning applications. It offers a
suite of standardized scripts tailored for anatomical, functional, and
diffusion magnetic resonance imaging (MRI), ensuring consistent and
high-quality data preparation across studies. In addition to preprocessing
pipelines, brainprep includes robust quality control (QC) routines to help
researchers assess data integrity and detect potential artifacts or anomalies.
- Official source code repo: https://github.com/neurospin-projects/cookbook
- HTML documentation (stable release): https://neurospin-projects.github.io/cookbook/stable
- HTML documentation (dev): https://neurospin-projects.github.io/cookbook/dev
The required dependencies to use the software are listed in the file pyproject.toml.