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    20 repositories

    • LLM_SDoH

      Public
      Python
      •2•9•0•0•Updated Jan 12, 2025Jan 12, 2025

    • FPdiffmaps

      Public
      Fokker-Planck diffusion maps for dimensional reduction of stochastic systems
      Jupyter Notebook
      •1•0•0•0•Updated Dec 6, 2024Dec 6, 2024

    • Risk_factors_for_severe_COVID19_outcomes_a_study_of_IMIDs_medications_comorbidities

      Public
      This contains the code used to conduct the analyses for Qi et al. 2022 paper on the analysis of Risk factors for severe COVID-19 outcomes: a study of immune-med…
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated Oct 30, 2024Oct 30, 2024

    • EHRMLA_KPs

      Public
      Repo and Documentation of the Multiomics Electronic-Health-Record (EHR) Machine Learning Analysis (MLA) May Treat KP via Plater.
      0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

    • multiomics_wellness_kp

      Public
      Python
      •3•0•0•0•Updated Sep 13, 2024Sep 13, 2024

    • PSM_Maternity_at_scale

      Public
      Python
      •1•0•0•0•Updated Aug 17, 2024Aug 17, 2024

    • Multiomics_ClinicalTrials_KP

      Public
      ETL of ClinicalTrials.gov data for NCATS Biomedical Translator
      Jupyter Notebook
      •4•1•0•0•Updated May 8, 2024May 8, 2024

    • clinical_risk_kp

      Public
      Jupyter Notebook
      •
      Apache License 2.0
      •5•0•0•0•Updated May 8, 2024May 8, 2024

    • CEDA-Tools-v1.1

      Public
      The latest version (EHR up to 2023/05/31) of the CEDA tools
      Python
      •0•0•0•0•Updated Oct 4, 2023Oct 4, 2023

    • IMIDs_Maternity_Stats

      Public
      Python
      •0•0•0•0•Updated May 16, 2023May 16, 2023

    • COVID19_Maternity_Inpatient_Anticoagulant

      Public
      Python
      •0•0•0•0•Updated Apr 28, 2023Apr 28, 2023

    • COVID19_vaccination_in_pregnancy

      Public
      This contains the code used to conduct the analyses for Piekos et al. 2022 paper on the impact of COVID-19 vaccination on maternal-fetal outcomes
      Python
      •
      MIT License
      •1•0•0•0•Updated Apr 18, 2023Apr 18, 2023

    • CEDA_tools_ver20221220

      Public
      These are general tools to extract and format data from PSJH EHR
      Python
      •
      MIT License
      •0•0•0•0•Updated Dec 21, 2022Dec 21, 2022

    • YH_SSRI_PTB

      Public
      SSRI_PTB project analysis codes written by Yeon Mi Hwang
      Jupyter Notebook
      •0•0•0•0•Updated May 28, 2022May 28, 2022

    • tSMOTE

      Public
      Jupyter Notebook
      •3•9•1•0•Updated Apr 29, 2022Apr 29, 2022

    • drug_response_kp

      Public
      Python
      •
      Apache License 2.0
      •5•0•0•0•Updated Dec 18, 2021Dec 18, 2021

    • biggim_kp

      Public
      BigGIM I (gene-gene expression correlations) parser to deploy KP using Service Provider tools
      Python
      •1•0•0•0•Updated Jun 2, 2021Jun 2, 2021

    • ehr_risk_kp_tools

      Public
      Utilities for querying and parsing results from the multiomics EHR Risk KP
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 1, 2021Mar 1, 2021

    • disease_severity_markers_kp

      Public
      Apache License 2.0
      •0•0•0•0•Updated Dec 8, 2020Dec 8, 2020

    • tcga_mut_freq_kp

      Public
      Python
      •
      Apache License 2.0
      •1•0•0•0•Updated Sep 4, 2020Sep 4, 2020