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1. scppin-py scppin-py Public

   Python implementation of scppin for module detection

   Python

2. neutrophil-temporal-analysis neutrophil-temporal-analysis Public

   Single-cell temporal analysis of neutrophils using DRVI

   HTML 9 2

3. favapy favapy Public

   Forked from mikelkou/fava

   Functional Associations using Variational Autoencoders

   Jupyter Notebook 1

4. Circe Circe Public

   Forked from cantinilab/Circe

   Co-accessibility network from single-cell ATAC-seq data. Python code with AnnData, based on Cicero algorithm.

   Python 2

5. scvi-multiome scvi-multiome Public

   Snakemake Workflow for using SCVI on scMultiome Datasets

   Python 1 4

6. fsctype-python fsctype-python Public

   Python