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Add MyST yml header to each notebook #27

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Merged
santisoler merged 4 commits into from
Nov 19, 2024
Merged

Add MyST yml header to each notebook #27

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b80bcdc
Add details to authors in myst.yml
santisoler Oct 4, 2024
d9d4a95
Add jupyterlab-myst to environment.yml
santisoler Oct 4, 2024
4e847b7
Set title and authors of notebooks in myst header
santisoler Oct 4, 2024
8d718ce
Merge branch 'main' into yml-header-authors
santisoler Nov 19, 2024
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1 change: 1 addition & 0 deletions environment.yml
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Expand Up @@ -8,6 +8,7 @@ dependencies:
- mystmd
# Notebook requirements
- jupyter
- jupyterlab-myst
- nbconvert
- simpeg==0.22.*
- discretize==0.10.*
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36 changes: 32 additions & 4 deletions myst.yml
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Expand Up @@ -15,11 +15,39 @@ project:
- open-source
authors:
- name: Devin Cowan
affiliations:
- University of British Columbia
id: devincowan
affiliations: ubc
roles:
- writing
- editing
- Software
Comment on lines +18 to +23
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@santisoler santisoler Oct 7, 2024

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@dccowan, do you have an ORCID number you might want to include here?

- name: Lindsey Heagy
id: lindseyheagy
affiliations: ubc
orcid: 0000-0002-1551-5926
roles:
- Supervision
- Administration
- Software
- name: Santiago Soler
affiliations:
- University of British Columbia
id: santisoler
affiliations: ubc
orcid: 0000-0001-9202-5317
roles:
- editing
- Software
affiliations:
- id: ubc
institution: University of British Columbia
ror: https://ror.org/03rmrcq20
isni: 0000 0001 2288 9830
department: Department of Earth, Ocean and Atmospheric Sciences
address: 2020 – 2207 Main Mall
city: Vancouver
region: British Columbia
country: Canada
postal_code: V6T 1Z4
phone: 604 822 2449
# bibliography: []
references:
python: https://docs.python.org/3/
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10 changes: 5 additions & 5 deletions notebooks/03-gravity/fwd_gravity_anomaly_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Forward Simulation of Gravity Anomaly Data"
"---\n",
"title: \"3D Forward Simulation of Gravity Anomaly Data\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** gravity survey, gravity anomaly, forward simulation, integral formulation, tensor mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/03-gravity/fwd_gravity_gradiometry_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Forward Simulation of Gravity Gradiometry Data"
"---\n",
"title: \"3D Forward Simulation of Gravity Gradiometry Data\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** gravity anomaly, forward simulation, integral formulation, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/03-gravity/inv_gravity_anomaly_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Inversion of Gravity Anomaly Data"
"---\n",
"title: \"3D Inversion of Gravity Anomaly Data\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** gravity anomaly, integral formulation, inversion, sparse norm, tensor mesh, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/04-magnetics/fwd_magnetics_induced_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Forward Simulation of TMI Data"
"---\n",
"title: \"3D Forward Simulation of TMI Data\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** total magnetic intensity, forward simulation, integral formulation, tensor mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/04-magnetics/fwd_magnetics_mvi_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Forward Simulation of Magnetic Gradiometry Data for Magnetic Vector Models"
"---\n",
"title: \"3D Forward Simulation of Magnetic Gradiometry Data for Magnetic Vector Models\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** gradiometry, magnetic vector model, forward simulation, integral formulation, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/04-magnetics/inv_magnetics_induced_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Inversion of TMI Data to Recover a Susceptibility Model"
"---\n",
"title: \"3D Inversion of TMI Data to Recover a Susceptibility Model\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** total magnetic intensity, integral formulation, inversion, sparse norm, tensor mesh, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/fwd_dcr_1d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 1D Forward Simulation for a Single Sounding"
"---\n",
"title: \"1D Forward Simulation for a Single Sounding\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC resistivity, forward simulation, apparent resistivity, 1D sounding, wires mapping.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/fwd_dcr_2d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 2.5D Forward Simulation"
"---\n",
"title: \"2.5D Forward Simulation\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC resistivity, forward simulation, 2.5D, apparent resistivity, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/fwd_dcr_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D Forward Simulation"
"---\n",
"title: \"3D Forward Simulation\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC Resistivity, forward simulation, 3D, apparent resistivity, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/inv_dcr_1d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 1D Inversion for a Single Sounding"
"---\n",
"title: \"1D Inversion for a Single Sounding\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC resistivity, 1D sounding, inversion, parametric, sparse norm, apparent resistivity, wires mapping.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/inv_dcr_2d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 2.5D DC Resistivity Inversion"
"---\n",
"title: \"2.5D DC Resistivity Inversion\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC resistivity, 2.5D inversion, sparse norm, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/05-dcr/inv_dcr_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D DC Resistivity Inversion"
"---\n",
"title: \"3D DC Resistivity Inversion\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** DC resistivity, 3D inversion, weighted least-squares, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/06-ip/fwd_ip_2d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 2.5D IP Forward Simulation"
"---\n",
"title: \"2.5D IP Forward Simulation\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** Induced polarization, 2.5D forward simulation, apparent chargeability, tree mesh.\n",
"\n",
"</br>\n",
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10 changes: 5 additions & 5 deletions notebooks/06-ip/fwd_ip_3d.ipynb
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Expand Up @@ -4,7 +4,11 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"# 3D IP Forward Simulation"
"---\n",
"title: \"3D IP Forward Simulation\"\n",
"authors:\n",
" - id: devincowan\n",
"---"
]
},
{
Expand All @@ -31,10 +35,6 @@
"cell_type": "markdown",
"metadata": {},
"source": [
"**Author:** Devin C. Cowan\n",
"\n",
"</br>\n",
"\n",
"**Keywords:** Induced polarization, 3D forward simulation, apparent chargeability, tree mesh.\n",
"\n",
"</br>\n",
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