ARBO is a Matlab/C++ package for simulation and analysis of arbovirus nonlinear dynamics.
CDPH arbovirus to PDF scraper
End to end Snakemake workflow for DENV-1 and DENV-2. FastQC, Trimmomatic, Picard, SPAdes, BWA, bcftools masked consensus at depth 10, MAFFT, IQ-TREE with GTR+G+I, BLAST driven context fetching, polyprotein translation and mutation tables. Includes full references and citation.
Culex tarsalis is a North American mosquito species known for being the principle vector of the West Nile virus along with other arboviruses. The purpose of this project is to examine local adaptation and range expansion in Culex mosquitoes.
Add a description, image, and links to the arbovirus topic page so that developers can more easily learn about it.
To associate your repository with the arbovirus topic, visit your repo's landing page and select "manage topics."