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Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
Updated
Aug 18, 2025
Cython
Python3 wrapper for parallelized gene prediction using Prodigal
Updated
Mar 3, 2023
Python
The current code I developed to compare the examples programs
Updated
Jun 20, 2014
Python
Projeto elaborado para WBDS LA CAMP- Anotação do genoma da bactéria Clostridium botulinum com pyrodigal e prokka
Updated
Mar 11, 2023
Jupyter Notebook
Pipeline to fetch species assemblies from NCBI, run MacSyFinder per genome, and emit clean system/component matrices.
Updated
Dec 4, 2025
Python
Comprehensive three-way consensus annotation pipeline for Giardia genomes (v5.0)
Updated
Nov 12, 2025
Shell
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