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@peer35 peer35 commented Dec 16, 2025

Some information on accessing Yoda from Python, both with the irods python client and iBridges, also taking a bit of a stab at alerting researchers to more advanced usage of iRODS. Researchers this is aimed at will generally be able to figure stuff out themselves, but they might not be aware these options exist.

While working on it I also noticed we lack context on how to actually work with data that's on Yoda. That topic sometimes leads to confusion or even disappointment with Yoda. So I've also added a page on analysing data stored in Yoda, inspired by a new page I found on the UU site: https://www.uu.nl/en/research/yoda/guide-to-yoda/analysing-data-in-yoda.

@olindensen77, does this look useful, any suggestions?
https://deploy-preview-643--ub-open-handbook.netlify.app/manuals/yoda/using_yoda/analysing_data
https://deploy-preview-643--ub-open-handbook.netlify.app/manuals/yoda/data_access/yoda_using_python

Closes #547

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Update irods info in Yoda manuals

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