Sjpp client 2.164.0

.env.development

@@ -1 +1,2 @@
 NEXT_PUBLIC_GEN3_COMMONS_NAME=gen3
+NEXT_PUBLIC_PROTEINPAINT_API=/auth/api/custom/proteinpaint

.env.production

@@ -1 +1,2 @@
 NEXT_PUBLIC_GEN3_COMMONS_NAME=gen3
+NEXT_PUBLIC_PROTEINPAINT_API=/auth/api/custom/proteinpaint

config/gen3/analysisTools.json

@@ -81,6 +81,39 @@
           "hideCounts" : true,
           "appId" : "CohortComparison",
           "countUnits": "Cases"
+        },
+        {
+          "title": "ProteinPaint",
+          "type": "application",
+          "hasDemo": false,
+          "loginRequired": false,
+          "description": "Visualize mutations in protein-coding genes by consequence type and protein domain.",
+          "icon": "/icons/apps/ProteinPaint.svg",
+          "appId" : "ProteinPaint",
+          "count": 1000,
+          "countUnits": "Cases"
+        },
+        {
+          "title": "OncoMatrix",
+          "type": "application",
+          "hasDemo": false,
+          "loginRequired": false,
+          "description": "Visualize the top most mutated cases and genes affected by high impact mutations in your cohort.",
+          "icon": "/icons/apps/OncoMatrix.svg",
+          "appId" : "OncoMatrix",
+          "count": 1000,
+          "countUnits": "Cases"
+        },
+        {
+          "title": "Set Operations",
+          "type": "application",
+          "hasDemo": false,
+          "loginRequired": false,
+          "description": "Display a Venn diagram and compare/contrast your cohorts or sets of the same type.",
+          "icon": "/icons/apps/SetOperations.svg",
+          "href": "/",
+          "count": 1000,
+          "countUnits": "Cases"
         }
       ]
     }

package.json

@@ -43,6 +43,7 @@
     "@next/mdx": "^15.5.7",
     "@oncojs/survivalplot": "^0.8.3",
     "@react-spring/web": "^9.7.5",
+    "@sjcrh/proteinpaint-client": "^2.164.1",
     "cookies-next": "^4.3.0",
     "echarts": "^5.5.1",
     "file-saver": "^2.0.5",

src/features/apps/OncoMatrix.tsx

@@ -0,0 +1,8 @@
+import React from "react";
+import { MatrixWrapper } from "../proteinpaint/MatrixWrapper";
+
+const MatrixApp: React.FC = () => {
+  return <MatrixWrapper chartType="matrix" />;
+};
+
+export default MatrixApp;

src/features/apps/ProteinPaint.tsx

@@ -0,0 +1,8 @@
+import React from "react";
+import { ProteinPaintWrapper } from "@/features/proteinpaint/ProteinPaintWrapper";
+
+const ProteinPaintApp: React.FC = () => {
+  return <ProteinPaintWrapper />;
+};
+
+export default ProteinPaintApp;