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update remaining fields phenopackets #34

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Merged
mshadbolt merged 9 commits into from
Feb 3, 2026
Merged

update remaining fields phenopackets #34

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194b1b2
update remaining fields phenopackets
SonQBChau Jan 26, 2026
7bfdf05
1800-01-01 date should be treated as None
SonQBChau Jan 30, 2026
7345602
fix typo
mshadbolt Jan 30, 2026
59c4af1
fix disease stages
mshadbolt Feb 2, 2026
9b98cdc
add followup status
mshadbolt Feb 2, 2026
5519a7e
combine ontology lookip
mshadbolt Feb 2, 2026
24fb95c
add biomarkers to measurements
mshadbolt Feb 2, 2026
71ee131
add pack years, relapse, fix cM mapping
mshadbolt Feb 3, 2026
a638cf8
group treatment info, condense method
mshadbolt Feb 3, 2026
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2 changes: 1 addition & 1 deletion schema.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -2352,7 +2352,7 @@ components:
type: string
description: >
The agent or organization that created the phenopacket.
submitter_by:
submitted_by:
type: string
description: >
Name of person who submitted the phenopacket
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